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IdTitle * Authors * Abstract * PictureThematic fields * RecommenderReviewersSubmission date
28 Feb 2024
STAGE 1

Changes in memory function in adults following SARS-CoV-2 infection: findings from the Covid and Cognition online study

Is memory affected in the long run following SARS-CoV-2 infection?

Recommended by ORCID_LOGO based on reviews by Phivos Phylactou, Dipanjan Ray and Mitul Mehta
COVID-19 has been suspected to have long-lasting effects on cognitive function. The SARS-CoV-2 virus may enter the central nervous system (Frontera et al., 2020; Miners, Kehoe, & Love, 2020), explaining the observed detrimental effects of COVID-19 on verbal planning and reasoning (Hampshire et al., 2021; Wild et al., 2021), executive function (Hadad et al., 2022), and long-term memory (Guo et al., 2022). In particular, Guo et al. (2022) used verbal item recognition and non-verbal associative memory tasks. Weinerova et al. (2024), in the current study, propose to conduct a replication of Guo et al. (2022), but specifically, to disentangle the effect of COVID-19 infection status on both memory type (item vs. associative) and stimulus modality (verbal vs. non-verbal). Furthermore, Weinerova et al. (2024) propose to analyze cognitive function based on vaccination status before infection to provide a critical test of the potential protective effects of vaccination on cognitive function.

Data collection has been completed with 325 participants after exclusion criteria were applied (COVID group N = 232, No COVID group N = 93). Simulations assuming an effect size observed in Guo et al. (2022), a Bayesian t-test comparing the groups, and a Bayes Factor of 6 indicated that N = 320 is sufficient to detect an effect on 79% of simulations. The main analyses will be conducted using a Bayesian ANCOVA that allows for the inclusion of control variables such as age, sex, country, and education level. Both accuracy and reaction times from the item and associative recognition tasks will be analyzed as the dependent variables. In one analysis, vaccination status will be included as a between-subjects factor, to understand whether vaccination status at the time of infection influences subsequent cognitive function. 

It is important to note that participants were recruited through long-COVID Facebook groups and clinics. Therefore, the results must be interpreted carefully to avoid generalizing to all COVID-19 infections. The data are part of a larger longitudinal study, and the current pre-registration applies only to the baseline timepoint for a cross-sectional analysis. The remaining longitudinal data collection is ongoing and is not part of the current pre-registration.  

The study plan was refined after one round of review, with input from three external reviewers who all agreed that the proposed study was well-designed and scientifically valid. The recommender then reviewed the revised manuscript and judged that the study met the Stage 1 criteria for in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/tjs5u (under temporary private embargo)
 
Level of bias control achieved: Level 3. At least some data/evidence that will be used to the answer the research question has been previously accessed by the authors (e.g. downloaded or otherwise received), but the authors certify that they have not yet observed ANY part of the data/evidence.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Frontera, J., Mainali, S., Fink, E.L. et al. Global Consortium Study of Neurological Dysfunction in COVID-19 (GCS-NeuroCOVID): Study Design and Rationale. Neurocrit Care 33, 25–34 (2020). https://doi.org/10.1007/s12028-020-00995-3

2. Guo, P., Benito Ballesteros, A., Yeung, S. P., Liu, R., Saha, A., Curtis, L., Kaser, M., Haggard, M. P. & Cheke, L. G. (2022). COVCOG 2: Cognitive and Memory Deficits in Long COVID: A Second Publication From the COVID and Cognition Study. Frontiers in Aging Neuroscience. https://doi.org/10.3389/fnagi.2022.804937  

3. Hadad, R., Khoury, J., Stanger, C., Fisher, T., Schneer, S., Ben-Hayun, R., Possin, K., Valcour, V., Aharon-Peretz, J. & Adir, Y. (2022). Cognitive dysfunction following COVID-19 infection. Journal of NeuroVirology, 28(3), 430–437. https://doi.org/10.1007/s13365-022-01079-y  

4. Hampshire, A., Trender, W., Chamberlain, S. R., Jolly, A. E., Grant, J. E., Patrick, F., Mazibuko, N., Williams, S. C., Barnby, J. M., Hellyer, P. & Mehta, M. A. (2021). Cognitive deficits in people who have recovered from COVID-19. EClinicalMedicine, 39, 101044. https://doi.org/10.1016/j.eclinm.2021.101044

5. Miners, S., Kehoe, P. G., & Love, S. (2020). Cognitive impact of COVID-19: looking beyond the short term. Alzheimer's research & therapy, 12, 1-16. https://doi.org/10.1186/s13195-020-00744-w 
 
6. Weinerova, J., Yeung, S., Guo, P., Yau, A., Horne, C., Ghinn, M., Curtis, L., Adlard, F., Bhagat, V., Zhang, S., Kaser, M., Bozic, M., Schluppeck, D., Reid, A., Tibon, R. & Cheke, L. G. (2024). Changes in memory function in adults following SARS-CoV-2 infection: findings from the Covid and Cognition online study. In principle acceptance of Version 2 by Peer Community in Registered Reports. https://osf.io/tjs5u

7. Wild, C. J., Norton, L., Menon, D. K., Ripsman, D. A., Swartz, R. H. & Owen, A. M. (2022). Disentangling the cognitive, physical, and mental health sequelae of COVID-19. Cell Reports Medicine, 3, 100750. https://doi.org/10.1016/j.xcrm.2022.100750 
Changes in memory function in adults following SARS-CoV-2 infection: findings from the Covid and Cognition online studyJosefina Weinerova, Sabine Yeung, Panyuan Guo, Alice Yau, Connor Horne, Molly Ghinn, Lyn Curtis, Francess Adlard, Vidita Bhagat, Seraphina Zhang, Muzaffer Kaser, Mirjana Bozic, Denis Schluppeck, Andrew Reid, Roni Tibon, Lucy Cheke<p>SARS-CoV-2, the virus responsible for the Covid-19 pandemic, has been shown to have an impact on cognitive function, but the specific aspects of cognition that are affected remain unclear. In this Registered Report, we present a study aimed at ...Life SciencesVishnu Sreekumar2023-08-14 11:09:45 View
06 Jun 2024
STAGE 1

Causal dynamics of task-relevant rule and stimulus processing in prefrontal cortex

Functional specificity of cognitive updating in human prefrontal cortex

Recommended by ORCID_LOGO based on reviews by Phivos Phylactou
One of the hallmarks of cognitive control is the ability to flexibly update attention and action when goals change. The prefrontal cortex has long been identified as important for such updating, but much remains to be understood about the anatomical and temporal mechanisms that support cognitive flexibility within prefrontal networks. In the current study, Jackson et al. (2024) build upon insights from recent transcranial magnetic stimulation (TMS) and neuroimaging studies to investigate the critical role of prefrontal cortex for updating goals and selecting behaviourally-relevant stimuli.
 
To measure updating, the authors deploy an attentional switching paradigm in which participants selectively attend to one feature of a novel object (colour or form) while ignoring the other feature. On each trial, a symbol (called a rule cue) indicates whether to attend to the colour (green or blue) or to the form (X or non-X) of the upcoming object. By mapping each stimulus response to a separate button press (two buttons for the two colours; two buttons for the two features), the authors can then categorise different types of behavioural errors – focusing especially on attending incorrectly to the task-irrelevant feature (rule error) vs. applying the correct rule but failing to correctly identify the task-relevant feature (stimulus error). If disruption of a specific cortical region causes a selective increase in one type of error, then this would indicate that the stimulated region is important for either rule processing or stimulus processing.
 
The proposal includes a number of key features that add depth and rigor to the investigation. First, to probe the anatomical specificity of cognitive control, the authors will contrast the effect of TMS delivered to different prefrontal regions that reside within different networks and may have divergent roles in cognitive control: the dorsolateral prefrontal cortex (dlPFC, part of the multiple-demand network) and dorsomedial prefrontal cortex (dmPFC, part of the default mode network). Moreover, unlike many previous TMS studies, the authors will use electric field modelling to normalise cortical stimulation strength between regions, enabling a more controlled anatomical comparison. Second, since the task involves responding to a rule cue and then selectively attending to a task-relevant feature, it is likely that a particular brain region could be selectively critical at a specific time – for instance, if dlPFC were important for rule processing then it should only be necessary shortly after (or around) presentation of the rule cue. To capture the temporal specificity of cortical involvement, the authors will apply a short burst of TMS at different times, beginning either +150ms after the cue or +700ms during stimulus processing. In a preliminary study, the authors used magnetoencephalography (MEG) in combination with the same behavioural task and multivariate pattern analysis (MVPA) to identify these epochs for TMS. Finally, the experiment includes a range of additional control conditions and quality checks to rule out alternative explanations of potential findings, such as TMS impairing perception of the rule cue rather than implementation of the rule, and the effect of peripheral TMS artefacts. Overall, the study promises to reveal a range of intriguing new insights into the timecourse and anatomical specificity of cognitive updating, with implications for theories of prefrontal cortical function.
 
The Stage 1 manuscript was evaluated over one round of in-depth review. Based on detailed responses to the reviewers' and recommender’s comments, the recommender judged that the manuscript met the Stage 1 criteria and therefore awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/7pxjz (under temporary private embargo)
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 

Jackon, J. B, Runhao, L., & Woolgar, A. (2024). Causal dynamics of task-relevant rule and stimulus processing in prefrontal cortex. In principle acceptance of Version 2 by Peer Community in Registered Reports. https://osf.io/7pxjz

Causal dynamics of task-relevant rule and stimulus processing in prefrontal cortexJade Buse Jackson Runhao Lu Alex Woolgar<p>The dorsolateral prefrontal cortex (dlPFC) is understood to be important for cognitive flexibility, enabling us to switch between different contexts or rules, and to selectively attend to the relevant aspects of a task. Conversely, the dorsomed...Life SciencesChris Chambers2023-09-28 13:13:30 View
25 Jun 2024
STAGE 1

Does ‘virtuality’ affect the role of prior expectations in perception and action? Comparing predictive grip and lifting forces in real and virtual environments

The role of prior expectations for lifting objects in virtual reality

Recommended by ORCID_LOGO based on reviews by 2 anonymous reviewers
As virtual reality environments become more common, it is important to understand our sensorimotor interactions with them. In real world settings, sensory information is supplemented by prior expectations from past experiences, aiding efficient action control. In VR, the relative role of expectations could decrease due to a lack of prior experience with the environment, or increase because sensory information is impoverished or ambiguous. Harris, Arthur and Buckingham (2024) propose to test these possibilities by comparing a real-world object lifting task and a VR version in which the same objects are lifted but visual feedback is substituted by a virtual view. The experiment uses the Size-Weight Illusion (SWI) and the Material Weight Illusion (MWI). In these paradigms, the visual appearance of the object induces expectations about weight that can affect the perception of weight during lifting, and the fingertip forces generated. The degree to which the visual appearance of objects induces differences in perceived weight, and in measured fingertip forces, will index the influence of prior expectations for these two paradigms. The analyses will test whether the influence of prior expectations is lower or higher in the VR set-up than in real-world lifting. The outcomes across tasks (SWI and MWI) and measures (perceived weight, fingertip forces) will broaden our understanding of the role of predictive sensorimotor control in novel virtual environments.
 
After three rounds of evaluation, with input from two external reviewers, the recommender judged that the Stage 1 manuscript met the criteria for in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/36jhb
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Harris, D. J., Arthur, T., & Buckingham, G. (2024). Does ‘virtuality’ affect the role of prior expectations in perception and action? Comparing predictive grip and lifting forces in real and virtual environments. In principle acceptance of Version 4 by Peer Community in Registered Reports. https://osf.io/36jhb
 
Does ‘virtuality’ affect the role of prior expectations in perception and action? Comparing predictive grip and lifting forces in real and virtual environmentsDavid J. Harris, Tom Arthur, & Gavin Buckingham<p>Recent theories in cognitive science propose that prior expectations strongly influence how individuals perceive the world and control their actions. This influence is particularly relevant in novel sensory environments, such as virtual reality...Life SciencesRobert McIntosh Ben van Buren2023-11-22 12:25:57 View
19 Jun 2024
STAGE 1
article picture

Culture-Driven Neural Plasticity and Imprints of Body-Movement Pace on Musical Rhythm Processing

The interplay of music, movement, and culture on rhythm processing

Recommended by ORCID_LOGO based on reviews by Anne Keitel and 1 anonymous reviewer
The interplay of music, movement, and cultural experience shapes rhythm perception. From bouncing babies and children at play, to tapping, clapping, and dancing, music often triggers synchronous body movements that can influence how we process rhythm. And, at the same time, long-term exposure to specific musical traditions shapes how we perceive and interpret rhythms.
 
However, direct behavioural and neuroscientific evidence on how these processes occur remains scarce. In this programmatic submission, comprising two complementary Stage 2 reports, Guérin et al. (2024) will investigate how body movements shape the processing of auditory information, and how previous short-term motor practice and long-term cultural experience interact to shape neural and behavioural responses to rhythmic stimuli. The authors will record in separate sessions both  electroencephalography (EEG) and hand clapping, in response to rhythms from West/Central Africa. These recordings will be conducted before and after a session in which participants will clap/step to either a three or a four-beat metre that is expected to influence how they interpret a rhythm.
 
The first Stage 2 report, which will be conducted on African-enculturated participants, aims to demonstrate how body-movement pace flexibly imprints on human sensory processing. The authors build on various theoretical models that emphasise the role of motor production in metre perception, and predict that both neural and behavioural entrainment will improve following movement, matching the rhythmic pattern set by the previous body movements.
 
The second Stage 2 report aims to uncover how short-term motor practice and long-term cultural experience interact to shape responses to rhythmic stimuli, by integrating short-term motor practice and long-term cultural experience. For this, the authors will test separate groups of participants from distinct cultural backgrounds (African vs. Western-enculturated), which are predicted to show neural and behavioural differences in their preferred metric mapping before body movement, and expect that neural and behavioural entrainment will improve after movement, especially for the metre set by prior movements, and more significantly for the metre common in the participant's culture.
 
Together, the findings from the planned Stage 2 reports are expected to clarify how long-term cultural background and short-term motor practice imprint onto rhythm processing in humans. This research will enhance our understanding of how cultural experience, body movement, and neural plasticity interact in music processing.
 
The Stage 1 manuscript was evaluated over three rounds of in-depth review. Based on detailed responses to the reviewers' and recommender's comments, the recommender judged that the manuscript met the Stage 1 criteria and awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/skuyc
 
Level of bias control achieved: Level 6. Data collection commenced during the later part of Stage 1 peer review; however, since no changes to the design were made after this point, the risk of bias due to prior data observation remains zero and the manuscript therefore qualifies for Level 6.
 
List of eligible PCI RR-friendly journals:
 
References
 
Guérin, S. M. R., Coulon, E., Lenc, T., Polak, R., Keller, P. E., & Nozaradan, S. (2024). Culture-Driven Neural Plasticity and Imprints of Body-Movement Pace on Musical Rhythm Processing. In principle acceptance of Version 2.1 by Peer Community in Registered Reports. https://osf.io/skuyc
Culture-Driven Neural Plasticity and Imprints of Body-Movement Pace on Musical Rhythm ProcessingSégolène M. R. Guérin, Emmanuel Coulon, Tomas Lenc, Rainer Polak, Peter E. Keller, Sylvie Nozaradan<p>The proposed programmatic registered report aims at capturing direct neuroscientific evidence for the rhythmic, movement-related shaping of auditory information with a cross-cultural perspective. Specifically, West/Central African- and Western-...Life SciencesJuan David LeongómezAnonymous2023-11-30 11:36:06 View
17 Jun 2024
STAGE 1

Neophobia across social contexts in juvenile Herring gulls

Does social context influence neophobia in juvenile herring gulls (Larus argentatus)?

Recommended by ORCID_LOGO based on reviews by 2 anonymous reviewers
Many animals are increasingly reliant on living close or in urban environments. For them, neophobia – a trait that denotes the fearfulness of novelty (Mettke-Hoffmann, 2022) – may influence how well the species but also individuals of the same species adjust to the (human-induced) changes that characterise these environments (Lowry et al., 2013).
 
Typically, neophobia in non-human animals is assessed through behavioural tests, most often by measuring the time it takes an individual to approach a novel object or food that is positioned next to a novel object. Increasingly, resarchers are acknowledging that the social context may influence the behaviour of individuals in such situations, and several hypotheses have been proposed to explain a potential influence of social context on neophobic responses. 
 
In the current study, Allaert et al. (2024) will use a within-subject design to test three hypotheses with juvenile herring gulls (Larus argentatus): 1) the risk dilution hypothesis, accoding to which gulls will exhibit smaller neophobic responses when tested in a group than when tested alone, 2) the negotiation hypothesis, according to which gulls will exhibit stronger neophobic responses when tested in a group than when tested alone, and 3) the social conformity hypothesis, according to which those more neophobic individuals will show a smaller neohobic response when tested in a group than when tested alone while less neophobic individuals will exhibit the opposite pattern.
 
The Stage 1 manuscript was evaluated by two reviewers over two rounds of revisions. During the revisions, the authors clarified the conceptual arguments of the manuscript (including why juveniles are being tested), and edited the methods, including timing of testing, adjustments to the way that the experimental and control conditions will be run, how the planned sample size will be ensured given that at the time of testing, some chicks may be of a different species (this will become evident later on), how relatedness between the chicks will be dealt with, as well as how the behavioural coding will be conducted. Thus, the recommender judged that the manuscript met the Stage 1 criteria and awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/u4b7q
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA. 
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Mettke-Hofmann, C. (2022). Neophobia. In: Vonk, J., Shackelford, T.K. (eds) Encyclopedia of Animal Cognition and Behavior. Springer, Cham. https://doi.org/10.1007/978-3-319-55065-7_908
 
2. Lowry, H., Lill, A., & Wong, B. B. (2013). Behavioural responses of wildlife to urban environments. Biological Reviews, 88, 537-549. https://doi.org/10.1111/brv.12012
 
3.  Allaert, R., Knoch, S., Braem, S., Debeer, D, Martel, A., Müller, W., Stienen E., Lens, L., & Verbruggen. F. (2024) In principle acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/u4b7q
Neophobia across social contexts in juvenile Herring gullsReinoud Allaert, Sophia Knoch, An Martel, Wendt Müller, Eric Stienen, Luc Lens, Frederick Verbruggen<p>Neophobia, the fear or avoidance of the unfamiliar, can have significant fitness consequences. It is typically assessed by exposing individuals to unfamiliar objects when they are alone, but in social species the presence of conspecifics can in...Life SciencesLjerka Ostojic2024-02-16 14:50:02 View
27 Mar 2024
STAGE 2
(Go to stage 1)

Registered Report: Are anticipatory auditory predictions enhanced in tinnitus and independent of hearing loss?

Evidence for the role of predictive coding in subjective tinnitus

Recommended by ORCID_LOGO based on reviews by Will Sedley, Pia Brinkmann and Emilie Cardon
Subjective tinnitus is a common disorder in which people experience a persistent sound in the absence of any external source. The underlying causes of tinnitus are debated – although the condition is strongly associated with hearing loss resulting from auditory damage, much remains to be understood about the neural processes that give rise to the phantom perception. Various classes of neurophysiological theories have been proposed, including the “altered gain” model – in which neurons in the auditory pathway increase their responsiveness to compensate for reduced auditory input following hearing loss – and the “noise cancellation” model – in which disrupted feedback connections from limbic regions are unable to tune out phantom signals. Although these theories account for much observed data, they have not been conclusively supported, and their ability to explain tinnitus is limited by the fact that hearing loss and tinnitus can arise independently and at different times.
 
In the current study, Reisinger et al. (2024) tested an emerging alternative theory based on a Bayesian predictive-coding framework (Sedley et al., 2016) in which the alteration of perceptual priors leads the auditory system to expect a sound that, if functioning normally, it should not expect. Using magnetoencephalography (MEG) in a sample of tinnitus patients (and carefully-matched controls for age, gender, and level of hearing loss), they asked whether tinnitus is associated with anticipatory brain activation, tuned to the carrier-frequency of an expected auditory stimulus. Specifically, the authors predicted that if the predictive-coding framework is correct then individuals with tinnitus should show different regularity-dependent pre-activations of carrier- frequency-specific information compared to the control group, while tone carrier-frequencies should be processed normally in tinnitus patients. They also predicted that any such pre-activations should not be related to levels of reported subjective tinnitus distress, as measured with the short version of the Tinnitus Questionnaire (mini-TQ).
 
The results broadly confirmed the hypotheses, with some caveats. Statistically significant differences in regularity-dependent pre-activations were observed between the tinnitus and control groups, however – curiously – the effects appear to be driven by below-chance decoding in the control group, complicating the interpretration. At the same time, consistent with expectations, frequency processing did not differ significantly between individuals with and without tinnitus, and the observed pre-activations were not significantly related to tinnitus distress. Overall, the findings cautiously support the conclusion that chronic tinnitus is associated with maladaptively upregulated predictive neural processing, and that this phenomenon is unlikely to be explained by either tinnitus distress or hearing loss.
 
The Stage 2 manuscript was evaluated over one round of in-depth review. Based on detailed responses to the reviewers' comments, the recommender judged that the manuscript met the Stage 2 criteria and awarded a positive recommendation.
 
URL to the preregistered Stage 1 protocol: https://osf.io/6gvpy
 
Level of bias control achieved: Level 3. At least some data/evidence that was used to the answer the research question had been previously accessed by the authors (e.g. downloaded or otherwise received), but the authors certify that they had yet observed any part of the data/evidence prior to Stage 1 IPA.
 
List of eligible PCI RR-friendly journals: 
 
 
References
 
1. Reisinger, L., Demarchi, G., Rösch, , S., Trinka, E., Obleser, L., & Weisz, N. (2024). Registered Report: Are anticipatory auditory predictions enhanced in tinnitus and independent of hearing loss? [Stage 2] Acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/9wqjh
 
2. Sedley, W., Friston, K. J., Gander, P. E., Kumar, S., & Griffiths, T. D. (2016). An integrative tinnitus model based on sensory precision. Trends in Neurosciences, 39, 799-812. https://doi.org/10.1016/j.tins.2016.10.004
Registered Report: Are anticipatory auditory predictions enhanced in tinnitus and independent of hearing loss?L. Reisinger, G. Demarchi, S. Rösch, E. Trinka, J. Obleser, N. Weisz<p>Phantom perceptions occur without any identifiable environmental or bodily source. The mechanisms and key drivers behind phantom perceptions like tinnitus are not well understood. The dominant “altered-gain”-framework suggests that tinnitus res...Life SciencesChris Chambers2024-02-21 16:17:33 View
12 Jul 2024
STAGE 1

Associations between anxiety-related traits and fear acquisition and extinction - an item-based content and meta-analysis

Integrative meta-analysis of anxiety-related traits and fear processing: bridging research to clinical application

Recommended by ORCID_LOGO based on reviews by Yoann Stussi, Luigi Degni, Marco Badioli and 1 anonymous reviewer
The paper aims to bridge gaps in understanding the relationship between anxiety-related traits and fear processing, with a specific focus on fear acquisition and extinction. Fear and safety processing are known to be linked to anxiety symptoms and traits such as neuroticism and intolerance of uncertainty (Lonsdorf et al., 2017; Morriss et al., 2021). However, the diversity in study focus and measurement methods makes it difficult to integrate findings into clinical practice effectively.
 
To address this issue, Brunsch et al. (2024) propose a systematic literature search and meta-analysis, following PRISMA guidelines, to explore these associations. They plan to use nested random effects models to analyze both psychophysiological and self-report outcome measures. Additionally, they will examine the role of different questionnaires used to assess anxiety-related traits and conduct a content analysis of these tools to evaluate trait overlaps.
 
Current knowledge from the literature indicates that individuals with anxiety disorders exhibit differences in fear acquisition and extinction compared to those without such disorders (Lonsdorf et al., 2017; Morriss et al., 2021). Previous meta-analyses have shown associations between anxiety traits and fear generalization/extinction, but these studies are limited in their scope and focus.
 
The primary aim of the research is to provide a comprehensive summary of the associations between anxiety-related traits and conditioned responding during fear acquisition and extinction across multiple measures. Another goal is to investigate whether different anxiety-related trait questionnaires yield different associations with fear and extinction learning. The authors will also conduct a content analysis to better interpret the results of their meta-analysis by examining the overlap in questionnaire content.
 
A secondary aim of the study is to evaluate how sample characteristics, experimental specifics, and study quality influence the associations between anxiety-related traits and fear acquisition and extinction. By addressing these aims, the study seeks to advance the understanding of fear-related processes in anxiety and inform more targeted prevention and intervention strategies.
 
The Stage 1 manuscript underwent two rounds of thorough review. After considering the detailed responses to the reviewers' comments, the recommender determined that the manuscript met the Stage 1 criteria and granted in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/4mndj
 
Level of bias control achieved: Level 3. At least some data/evidence that will be used to the answer the research question has been previously accessed by the authors (e.g. downloaded or otherwise received), but the authors certify that they have not yet observed ANY part of the data/evidence.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Bruntsch, M., Abend, R., Chalkia, A., Cooper, S. E., Ehlers, M. R., Johnson, D. C., Klingelhöfer-Jens, M., Morriss, J., Zika, O., & Lonsdorf, T. B. (2024). Associations between anxiety-related traits and fear acquisition and extinction - an item-based content and meta-analysis. In principle acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/4mndj
 
2. Lonsdorf, T. B., & Merz, C. J. (2017). More than just noise: Inter-individual differences in fear acquisition, extinction and return of fear in humans - Biological, experiential, temperamental factors, and methodological pitfalls. Neuroscience & Biobehavioral Reviews, 80, 703–728. https://doi.org/10.1016/j.neubiorev.2017.07.007
 
3. Morriss, J., Wake, S., Elizabeth, C., & van Reekum, C. M. (2021). I Doubt It Is Safe: A Meta-analysis of Self-reported Intolerance of Uncertainty and Threat Extinction Training. Biological Psychiatry Global Open Science, 1, 171–179. https://doi.org/10.1016/j.bpsgos.2021.05.011
Associations between anxiety-related traits and fear acquisition and extinction - an item-based content and meta-analysisMaria Bruntsch, Samuel E Cooper, Rany Abend, Marian Boor, Anastasia Chalkia, Mana Ehlers, Artur Czeszumski, Dave Johnson, Maren Klingelhöfer-Jens, Jayne Morriss, Erik Mueller, Ondrej Zika, Tina Lonsdorf <p>Background: Deficits in learning and updating of fear and safety associations have been reported in patients suffering from anxiety- and stress-related disorders. Also in healthy individuals, anxiety-related traits have been linked to altered f...Life SciencesSara GarofaloAnonymous, Luigi Degni, Marco Badioli, Yoann Stussi2024-03-15 14:48:20 View
06 Sep 2024
STAGE 2
(Go to stage 1)

One and only SNARC? Spatial-Numerical Associations are not fully flexible and depend on both relative and absolute magnitude

A Registered Report demonstration that the SNARC effect depends on absolute as well as relative number magnitude

Recommended by ORCID_LOGO based on reviews by Claudia Gianelli
The Spatial-Numerical Association of Response Codes (SNARC) effect refers to the fact that smaller numbers receive faster responses with the left hand, and larger numbers with the right hand (Dehaene et al., 1993). This robust finding implies that numbers are associated with space, being represented on a mental number line that progresses from left to right. The SNARC effect is held to depend on relative number magnitude, with the mental number line dynamically adjusting to the numerical range used in a given context. This characterisation is based on significant effects of relative number magnitude, with no significant influence of absolute number magnitude. However, a failure to reject the null hypothesis is not firm evidence for the absence of an effect. In this Registered Report, Roth and colleagues (2024) report two large-sample online experiments, with a Bayesian statistical approach to confirm—or refute—a role for absolute number magnitude in modulating the classic SNARC effect (smallest effect size of interest, d = 0.15).
 
Experiment 1 closely followed Dehaene’s (1993) original methods, and found strong evidence for an influence of relative magnitude, and moderate-to-strong evidence against an influence of absolute magnitude. Experiment 2 was designed to exclude some potential confounds in the original method, and this second experiment found strong evidence for both relative and absolute magnitude effects, of comparable effect sizes (in the range of d = .24 to .42). This registered study demonstrates that the SNARC effect is not ‘fully flexible’, in the sense of depending only on relative number magnitude; it is also shaped by absolute magnitude.
 
This Stage 2 manuscript was evaluated by the recommender and one external reviewer. Following appropriate minor revisions, the recommender judged that the manuscript met the Stage 2 criteria for recommendation.
 
URL to the preregistered Stage 1 protocol: https://osf.io/ae2c8
 
Level of bias control achieved: Level 6. No part of the data or evidence that was used to answer the research question was generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Dehaene, S., Bossini, S., & Giraux, P. (1993). The mental representation of parity and number magnitude. Journal of Experimental Psychology: General, 122, 371–396. https://doi.org/10.1037/0096-3445.122.3.371
 
2. Roth, L., Caffier, J., Reips, U.-D., Nuerk, H.-C., Overlander, A. T. & Cipora, K. (2023). One and only SNARC? Spatial-Numerical Associations are not fully flexible and depend on both relative and absolute magnitude [Stage 2]. Acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/epnd4
One and only SNARC? Spatial-Numerical Associations are not fully flexible and depend on both relative and absolute magnitudeLilly Roth, John Caffier, Ulf-Dietrich Reips, Hans-Christoph Nuerk, Annika Tave Overlander, Krzysztof Cipora<p>Numbers are associated with space, but it is unclear how flexible these associations are. We investigated whether the SNARC effect (Spatial-Numerical Association of Response Codes; Dehaene et al., 1993; i.e., faster responses to small/large num...Life SciencesRobert McIntosh2024-06-10 15:00:30 View
15 Nov 2023
STAGE 1

Somatosensory Response Changes During Illusory Finger Stretching

Neural responses to a finger-stretching illusion in human somatosensory cortex

Recommended by ORCID_LOGO based on reviews by Harry Farmer, Alexandra Mitchell and Susanne Stoll
Chronic pain is a major cause of disability that can often poorly managed with pharmacological treatments. This has prompted the exploration of other interventions like resizing illusions of body parts in augmented reality. These illusions have shown promise in conditions like osteoarthritis and complex regional pain syndrome, but it remains unclear how they alter the neural representation of body parts in the brain. The study by Hansford and colleagues aims to investigate these mechanisms in healthy participants, using somatosensory steady state evoked potentials (SSEP) and self-report questionnaires.
 
The study will involve finger stretching in an augmented reality setup that allows the researchers to independently manipulate visual and tactical stimulation. Assuming that multisensory stimulation indeed produces a robust illusion, the researchers will quantify the somatosensory evoked potentials in multisensory, unisensory, and two non-illusion control conditions. The study will provide inights into the neural mechanisms of these illusions and lay the ground for future investigations of these processes as a potential treatment for chronic pain.
 
The manuscript was evaluated over seven rounds of in-depth review by the recommender and three expert reviewers. After substantial revisions, the recommender judged that the manuscript met the Stage 1 criteria and awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/u6gsb
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 

References
 
1. Hansford, K. J., Baker, D. H., McKenzie, K. J., & Preston, C. E. J. (2023). Somatosensory Response Changes During Illusory Finger Stretching. In principle acceptance of Version 7 by Peer Community in Registered Reports. https://osf.io/u6gsb
Somatosensory Response Changes During Illusory Finger Stretching Kirralise J. Hansford, Daniel H. Baker, Kirsten J. McKenzie & Catherine E. J. Preston<p>Resizing illusions, delivered using augmented reality, resize a body part through either stretching or shrinking manipulations. These resizing illusions have been investigated in visuotactile, visual-only and visuo-auditory presentations. Howev...Life Sciences, Medical SciencesD. Samuel Schwarzkopf2022-11-15 17:17:18 View
27 Jun 2023
STAGE 1

Functional MRI brain state occupancy in the presence of cerebral small vessel disease -- pre-registration for a replication analysis of the Hamburg City Health Study

Testing the replicability of dynamic functional connectivity correlates of cerebral small vessel disease in the Hamburg City Health Study

Recommended by ORCID_LOGO based on reviews by Olivia Hamilton and 1 anonymous reviewer
A recent study has reported that the extent of cerebral small vessel disease (cSVD) shows associations with dynamic functional connectivity measures obtained from resting state functional MRI scans (Schlemm et al, 2022). Specifically, when the functional scan was parsed into time spent in discrete brain states, the proportion of time spent in the two most-occupied states was negatively related to a structural indicator of cSVD (volume of white matter hyperintensities of presumed vascular origin). This measure of 'fractional occupancy' was also associated with cognitive impairment as indicated by longer time to complete part B of the Trail Making Test. These findings were based on the analysis of data from 988 participants in the Hamburg City Health Study (HCHS).
 
In the present Registered Report, Schlemm (2023) will test whether these associations can be replicated in an independent sample of participants from the HCHS, not included in the earlier analysis (projected N for new analysis ~1500). In addition to the two main hypothesis tests, an exploratory multiverse analysis will be reported, systematically varying some key parameters of the MRI processing pipeline to provide further information about the robustness of the outcome of the primary hypothesis test. 
 
The Stage 1 plan was refined over two rounds of review by two relevant experts, with additional input from the recommender on the specification of the registered plan. Both reviewers are satisfied that the plan constitutes an appropriate approach to this question, and on the basis of their comments and his own evaluation, the recommender judged that the Stage 1 report meets the criteria for in-principle acceptance.
 
URL to the preregistered Stage 1 protocol: https://osf.io/9yhzc
 
Level of bias control achieved: Level 2. At least some data/evidence that will be used to answer the research question has been accessed and partially observed by the authors, but the authors certify that they have not yet observed the key variables within the data that will be used to answer the research question AND they have taken additional steps to maximise bias control and rigour.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Schlemm, E., Frey, B. M., Mayer, C., Petersen, M., Fiehler, J., Hanning, U., Kühn, S., Twerenbold, R., Gallinat, J., Gerloff, C., Thomalla, G. & Cheng, B. (2022). Equalization of brain state occupancy accompanies cognitive impairment in cerebral small vessel disease. Biological Psychiatry, 92, 592-602. https://doi.org/10.1016/j.biopsych.2022.03.019
 
2. Schlemm, E. (2023). Functional MRI brain state occupancy in the presence of cerebral small vessel disease – pre-registration for a replication analysis of the Hamburg City Health Study. In principle acceptance of Version 1.5 by Peer Community in Registered Reports. https://osf.io/9yhzc
Functional MRI brain state occupancy in the presence of cerebral small vessel disease -- pre-registration for a replication analysis of the Hamburg City Health StudyEckhard Schlemm<p>Objective: To replicate recent findings about the association between the extent of cerebral small vessel disease (cSVD), functional brain network dedifferentiation and cognitive impairment.</p> <p>Methods: We will analyze demographic, imaging...Life Sciences, Medical SciencesRobert McIntosh2022-11-19 14:21:28 View