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IdTitle * Authors * Abstract * PictureThematic fields * RecommenderReviewersSubmission date
15 Oct 2023
STAGE 1

Can one-shot learning be elicited from unconscious information?

Can unconscious experience drive perceptual learning?

Recommended by ORCID_LOGO based on reviews by Jeffrey Saunders and 1 anonymous reviewer
Unconscious priming effects have fascinated not just psychologists but also ad-makers and consumers alike. A related phenomenon in perception is illustrated by presenting participants with two-tone images, which are degraded versions of images of objects and scenes. These two-tone images look like and are indeed judged as meaningless dark and light patches. Upon presenting the actual template image, however, the two-tone image is accurately recognized. This perceptual learning is abrupt, robust, and long-lasting (Daoudi et al., 2017). Surprisingly, Chang et al. (2016) showed that such perceptual disambiguation of two-tone images can happen even in the absence of conscious awareness of having seen the template image. 
 
Halchin et al. (2023) in the current study propose to conduct a conceptual replication of Chang et al. (2016) with important modifications to the procedures to address limitations with the earlier work. Specifically, there was no explicit manipulation of levels of conscious awareness of the template images in the original study. Therefore, miscategorization of low-confidence awareness as unaware could have led to an erroneous conclusion about unconscious priors guiding perceptual learning. Such miscategorization errors and how to tackle them are of interest to the broader field of consciousness studies. Furthermore, a conceptual replication of Chang et al. (2016) is also timely given that prior related work suggests that masking impairs not only conscious awareness of visual features but also blocks processing of higher-level information about the images (e.g. object category). 
 
To address the issues identified above, Halchin et al. (2023) propose to experimentally manipulate conscious awareness by masking the template image very quickly (i.e., a short stimulus onset asynchrony; SOA) or by allowing some more time to induce weak and strong conscious awareness, respectively. The SOAs were validated through pilot studies. Furthermore, they include a four-point perceptual awareness scale instead of the original yes/no options to gauge participants’ subjective awareness of the template images. The authors also propose multiple experiments to include different ways of testing participants’ objective ability to identify the masked template images. Last but not least, the proposed design includes a stronger control condition than the original study by using masked images created from related images (e.g. belonging to the same semantic category). Depending on the results obtained in the main experiments, the inclusion of this control allows the authors to conduct a third experiment to investigate whether the results in the first two can be explained by semantic priming. The proposed study is sufficiently powered (as demonstrated through simulations), and Bayesian statistical procedures will be used to test the main hypotheses. In summary, the proposed work offers a significant improvement in terms of experimental procedures over the original study. If the Chang et al. (2016) results are replicated, the stronger design in the current study is likely to lead to a better understanding of the mechanisms underlying unconscious priors guiding perceptual learning. On the other hand, a failure to replicate not just Chang et al. (2016)’s results but also effects across the three experiments in the current study would raise legitimate questions about the reality of unconscious information guiding perceptual learning. 
 
The study plan was refined across two rounds of review, with input from two external reviewers who both agreed that the proposed study is well designed, timely, and scientifically valid. The recommender then reviewed the revised manuscript and judged that the study met the Stage 1 criteria for in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/juckg
 
Level of bias control achieved: Level 3. At least some of the data/evidence that will be used to answer the research question already exists AND is accessible in principle to the authors BUT the authors certify that they have not yet accessed any part of that data/evidence.
 
List of eligible PCI-RR-friendly journals:
 
 
References
 
1. Daoudi, L. D., Doerig, A., Parkosadze, K., Kunchulia, M. & Herzog, M. H. (2017). The role of one-shot learning in #TheDress. Journal of Vision, 17, 15-15. https://doi.org/10.1167/17.3.15 
 
2. Chang, R., Baria, A. T., Flounders, M. W., & He, B. J. (2016). Unconsciously elicited perceptual prior. Neuroscience of Consciousness, 2016. https://doi.org/10.1093/nc/niw008 
 
3. Halchin, A.-M., Teuful, C. & Bompas, A. (2023). Can one-shot learning be elicited from unconscious information? In principle acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/juckg
Can one-shot learning be elicited from unconscious information? Adelina-Mihaela Halchin, Christoph Teufel, Aline Bompas<p>The human brain has the remarkable ability to make sense of highly impoverished images once relevant prior information is available. Fitting examples of this effect are two-tone images, which initially look like meaningless black-and-white patc...Life SciencesVishnu Sreekumar2022-11-30 00:34:07 View
27 Mar 2024
STAGE 1

Registered Report: Are anticipatory predictions enhanced in tinnitus and independent of hearing loss?

Can predictive coding explain subjective tinnitus?

Recommended by ORCID_LOGO based on reviews by Will Sedley, Pia Brinkmann and Emilie Cardon
Subjective tinnitus is a common disorder in which people experience a persistent sound in the absence of any external source. The underlying causes of tinnitus are debated – although the condition is strongly associated with hearing loss resulting from auditory damage, much remains to be understood about the neural processes that give rise to the phantom perception. Various classes of neurophysiological theories have been proposed, including the “altered gain” model – in which neurons in the auditory pathway increase their responsiveness to compensate for reduced auditory input following hearing loss – and the “noise cancellation” model –  in which disrupted feedback connections from limbic regions are unable to tune out phantom signals. Although these theories account for much observed data, they have not been conclusively supported, and their ability to explain tinnitus is limited by the fact that hearing loss and tinnitus can arise independently and at different times.
 
In the current study, Reisinger et al. (2023) will test an emerging alternative theory based on a Bayesian predictive-coding framework (Sedley et al., 2016) in which the alteration of perceptual priors leads the auditory system to expect a sound that, if functioning normally, it should not expect. Using magnetoencephalography (MEG) in a sample of tinnitus patients (and carefully-matched controls for age, gender, and level of hearing loss), they will ask whether tinnitus is associated with anticipatory brain activation, tuned to the carrier-frequency of an expected auditory stimulus. Specifically, the authors predict that if the predictive-coding framework is correct then individuals with tinnitus should show different regularity-dependent pre-activations of carrier- frequency-specific information compared to the control group, while tone carrier-frequencies should be processed normally in tinnitus patients. They also predict that any such pre-activations should not be related to levels of reported subjective tinnitus distress, as measured with the short version of the Tinnitus Questionnaire (mini-TQ).
 
The Stage 1 manuscript was evaluated over two rounds of in-depth review. Based on detailed responses to the reviewers' comments, the recommender judged that the manuscript met the Stage 1 criteria and therefore awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/6gvpy
 
Level of bias control achieved: Level 3. At least some data/evidence that will be used to the answer the research question has been previously accessed by the authors (e.g. downloaded or otherwise received), but the authors certify that they have not yet observed ANY part of the data/evidence.
 
List of eligible PCI RR-friendly journals: 
 
 
References
 
Reisinger, L., Demarchi, G., Rösch, , S., Trinka, E., Obleser, L., & Weisz, N.  (2023). Registered Report: Are anticipatory predictions enhanced in tinnitus and independent of hearing loss? In principle acceptance of Version 4 by Peer Community in Registered Reports. https://osf.io/6gvpy
 
Sedley, W., Friston, K. J., Gander, P. E., Kumar, S., & Griffiths, T. D. (2016). An integrative tinnitus model based on sensory precision. Trends in Neurosciences, 39, 799-812. https://doi.org/10.1016/j.tins.2016.10.004
Registered Report: Are anticipatory predictions enhanced in tinnitus and independent of hearing loss?L. Reisinger, G. Demarchi, S. Rösch, E. Trinka, J. Obleser, N. Weisz<p>Phantom perceptions occur without any identifiable environmental or bodily source. The mechanisms and key drivers behind phantom perceptions like tinnitus are not well understood. The dominant view suggests that tinnitus results from hyperactiv...Life SciencesChris Chambers2023-01-03 08:35:12 View
25 Sep 2023
STAGE 1

Effects of Auditory Stimuli During Submaximal Exercise on Cerebral Oxygenation

Does listening to music alter prefrontal cortical activity during exercise?

Recommended by ORCID_LOGO based on reviews by David Mehler and 1 anonymous reviewer
The relationship between music and exercise has been studied for over a century, with implications for our understanding of biomechanics, physiology, brain function, and psychology. Listening to music while exercising is associated with a wide range of benefits, from increasing motivation, to reducing perceived exertion, inhibiting awareness of negative bodily signals, boosting mood, and ultimately improving physical performance. But while these ergogenic benefits of music are well documented, much remains to be discovered about how music alters brain function during exercise. One reason for this gap in understanding is the technical difficulty in recording brain activity during realistic exercise, as neuroimaging methods such as fMRI, EEG or MEG typically require participants to remain as still as possible.
 
In the current study, Guérin et al. (2023) will use the optical brain imaging technique of functional near infrared spectroscopy (fNIRS) to measure oxygenation of key brain areas during exercise. Unlike other neuroimaging methods, fNIRS has a high tolerance for motion artefacts, making it the ideal method of choice for the current investigation. The authors propose a series of hypotheses based on previous studies that observed a decrease in cerebral oxygenation during intense exercise, particularly within the medial prefrontal cortex (mPFC) and dorsolateral prefrontal cortex (dlPFC). If, as suggested, the prefrontal cortex is important for regulation of cognition and emotion during exercise, then the benefits of listening to music might arise by delaying or reducing this drop in prefrontal oxygenation.
 
Using a within-subject designs, Guérin et al. will combine an incremental exercise protocol involving a cycling task with three auditory conditions: asynchronous music (the active condition), listening to an audiobook (an auditory control) or silence (baseline control). Compared to the two control conditions, they predict that music exposure will increase oxygenation in prefrontal and parietal regions and will also delay the drop in oxygenation associated with intense exercise (specifically within dlPFC and mPFC). To test whether any such changes are specific for prefrontal and parietal cortex, they will also compare the haemodynamic responses of the occipital cortex between the auditory conditions, predicting no difference.
 
The Stage 1 manuscript was evaluated over two rounds of in-depth review. Based on detailed responses to the reviewers' comments, the recommender judged that the manuscript met the Stage 1 criteria and therefore awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/52aeb
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 

 

 

References
 
1. Guérin, S. M. R., Karageorghis, C. I., Coeugnet, M. R., Bigliassi, M. & Delevoye-Turrell, Y. N. (2023). Effects of Auditory Stimuli During Submaximal Exercise on Cerebral Oxygenation. In principle acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/52aeb

Effects of Auditory Stimuli During Submaximal Exercise on Cerebral OxygenationDr Ségolène M. R. Guérin, Professor Costas I. Karageorghis, Marine R. Coeugnet, Dr Marcelo Bigliassi and Professor Yvonne N. Delevoye-Turrell<p>Asynchronous music has been commonly used to reduce perceived exertion and render the exercise experience more pleasant. Research has indicated that in-task asynchronous music can reallocate an individual’s attentional focus to task-unrelated s...Life SciencesChris Chambers2023-01-24 12:06:32 View
27 Nov 2023
STAGE 1

Cortical voice processing in Autism Spectrum Disorder

Is voice processing impacted in Autism Spectrum Disorder?

Recommended by ORCID_LOGO and ORCID_LOGO based on reviews by 2 anonymous reviewers
Vocal sounds, including both speech and non-speech sounds, have been found to activate the Superior Temporal Sulci and Gyri in comparison to non-vocal sounds. These regions, termed Temporal Voice Areas (TVAs), are considered to be involved in early voice processing and therefore critical for social interaction. TVA activation has been examined in Autism Spectrum Disorder (ASD) to determine if the characteristic difficulties in social communication and interaction are linked to an impaired early voice processing. Using functional magnetic resonance imaging (fMRI), one study found typical brain activation in TVAs for 15 out of 16 autistic participants (Schelinski et al., 2016), whereas another found atypical activation in 4 out of 5 autistic participants (Gervais et al., 2004).
 
Here, the inconsistencies in the previous literature propel Gautier et al. (2023) to examine brain activation of TVAs with a larger sample size (26 ASD and 26 non-ASD participants). Gautier et al. (2023) will present vocal sounds and non-vocal sounds to both groups of participants during fMRI and predict that fewer participants in the ASD group will show a preferential response to voices in TVAs compared to the non-ASD group. These results would suggest that symptoms of ASD interfere with early stages of social interaction, at the level of voice processing.
 
This Stage 1 manuscript was evaluated in an initial round by the co-recommenders and another two rounds of in-depth review by two expert reviewers. With these revisions, the recommenders judged that the manuscript met the Stage 1 criteria and awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/538m4
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Gautier, R., Houy-Durand, E., Barantin, L., Briend, F. & Latinus, M. (2023). Cortical voice processing in Autism Spectrum Disorder. In principle acceptance of Version 4 by Peer Community in Registered Reports. https://osf.io/538m4
Cortical voice processing in Autism Spectrum DisorderRaphaël Gautier, Emmanuelle Houy-Durand, Laurent Barantin, Frederic Briend, Marianne Latinus<p>Voice processing is central to social functioning. A specific brain response to vocal sounds has been described and extensively characterized in the general population but remains critically unexplored in Autism Spectrum Disorder (ASD), a condi...Life SciencesGrace Edwards2023-03-28 09:51:48 View
08 Sep 2023
STAGE 1

Evaluation of spatial learning and wayfinding in a complex maze using immersive virtual reality. A registered report

Evaluation of an immersive virtual reality wayfinding task

Recommended by ORCID_LOGO based on reviews by Conor Thornberry, Gavin Buckingham and 1 anonymous reviewer
The Virtual Maze Task (VMT) is a digital desktop 2D spatial learning task that has been used for research into the effect of sleep and dreaming on memory consolidation (e.g. Wamsley et al, 2010). One limitation of this task has been low rates of reported dream incorporation. Eudave and colleagues (2023) have created an immersive virtual reality (iVR) version of the VMT, which they believe might be more likely to be incorporated into dreams. As an initial step in validating this task for research, they propose a within-subjects study to compare three measures of spatial learning between the 2D desktop and iVR versions. Based on a review of relevant literature, the prediction is that performance will be similar between the two task versions. The planned sample size (n = 62) is sufficient for a .9 power test of equivalence within effect size bounds of d = -.47 to .47. Additional independent variables (gender, perspective-taking ability) and dependent measures (self-reported cybersickness and sense of presence) will be recorded for exploratory analyses.
 
The study plan was refined across four rounds of review, with input from two external reviewers and the recommender, after which it was judged to satisfy the Stage 1 criteria for in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/wba2v
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
Eudave, L., Martínez, M., Valencia, M., & Roth D. (2023). Evaluation of spatial learning and wayfinding in a complex maze using immersive virtual reality. A registered report. In principle acceptance of Version 5 by Peer Community in Registered Reports.
 
Wamsley, E. J., Tucker, M., Payne, J. D., Benavides, J. A., & Stickgold, R. (2010). Dreaming of a learning task is associated with enhanced sleep-dependent memory consolidation. Current Biology, 20, 850–855. https://doi.org/10.1016/j.cub.2010.03.027
 
† There is one minor change that the authors should make to the Methods section, which is sufficiently small that it can be incorporated at Stage 2: "if both tests reject the null hypothesis (observed data is less/greater than the lower/upper equivalence bounds), conditions are considered statistically equivalent" >> suggest changing "less/greater" to "greater/lesser" for correct correspondence with "lower/upper".
Evaluation of spatial learning and wayfinding in a complex maze using immersive virtual reality. A registered reportEudave L., Martínez M., Valencia M., Roth D.<p style="text-align: justify;"><strong>Objectives</strong>: Mazes have traditionally been used as tools for evaluating spatial learning and navigational abilities in humans. They have been also utilized in sleep and dream research, as wayfinding ...Life SciencesRobert McIntosh2023-03-31 17:21:20 View
18 Oct 2023
STAGE 1

Putting things into perspective: Which visual cues facilitate automatic extraretinal symmetry representation?

Understanding how visual cues influence extraretinal representation of planar symmetry

Recommended by ORCID_LOGO and ORCID_LOGO based on reviews by Tadamasa Sawada, Guillaume Rousselet, Benoit Cottereau and Deborah Apthorp
Visual symmetry is critical to our interaction with our environment so that when detected, symmetry automatically produces a neural marker in the form of an Event Related Potential (ERP) called Sustained Posterior Negativity (SPN). However, when symmetry is presented to the visual system slanted away from the viewer, there is a reduction in SPN, termed a perspective cost. 
 
Considering ​objects are rarely presented front-on (or frontoparallel) in our natural environment, Karakashevska et al., (2023) plan to examine the extent of the perspective cost with the addition of visual cues to facilitate extraretinal representation of the visual symmetry. The authors will record electroencephalography (EEG) from 120 participants while they perform a luminance task on symmetrical and asymmetrical stimuli. The authors hypothesize perspective cost will be reduced by three perspective cues: 1) monocular viewing, when cue conflict caused by binocular viewing is eliminated, 2) a static frame surrounding the symmetrical stimulus, adding a depth cue, and 3) a moving frame, assisting 3D perception prior to the symmetry onset. If the SPN is equivalent during frontoparallel and slanted presentation in a cue condition, the authors will conclude extraretinal representation can be automatic when sufficient visual cues are available. The proposed experiment is powered to detect a relatively small difference between perspective cue conditions. This will solidify fundamental research on visual symmetry processing and will further our understanding of object perception and recognition. 
 
The Stage 1 manuscript was evaluated over three rounds by four expert reviewers. Following in-depth review and responses from the authors, the recommenders have determined that Stage 1 criteria was met and have awarded in-principle acceptance (IPA). 
​​​​
URL to the preregistered Stage 1 protocol: https://osf.io/yzsq5
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI-RR-friendly journals:
 
 
References
 
1. Karakashevska, E., Bertamini, M. & Makin, A. D. J. (2023). Putting things into perspective: Which visual cues facilitate automatic extraretinal symmetry representation? [Stage 1 Registered Report]. In principle acceptance of Version 4 by Peer Community in Registered Reports. https://osf.io/yzsq5
Putting things into perspective: Which visual cues facilitate automatic extraretinal symmetry representation?Elena Karakashevska, Marco Bertamini and Alexis D.J. Makin <p>A challenge for the visual brain is to identify objects from a range of different viewpoints. This study will determine the conditions under which the brain spends computational resources to achieve view-invariance. We focus on view-invariant r...Life SciencesGrace Edwards2023-04-17 21:52:26 View
15 Jan 2024
STAGE 1

Neurophysiological correlates of plasticity induced by paired associative stimulation (PAS) targeting the motor cortex: a TMS-EEG registered report

Can TMS-evoked potentials act as biomarkers of long-term potentiation or long-term depression induced by paired associative stimulation?

Recommended by ORCID_LOGO based on reviews by Domenica Veniero, Lindsay Oberman and 1 anonymous reviewer
What are the neurophysiological correlates of paired associative stimulation (PAS) in inducing plastic changes in human motor cortex (M1)? Here, Arrigoni and colleagues (2024) will apply transcranial magnetic stimulation (TMS) to left M1 paired with electrical stimulation of the right median nerve at an ISI of 25 ms or 10 ms to induce long-term potentiation (LTP) or long-term depression (LTD), respectively. Arrigoni and colleagues (2024) will determine if these stimulation pairings effect cortical excitability using motor-evoked potentials (MEPs) and TMS-evoked potentials (TEPs). Specifically, they hypothesize PASLTP will increase the peak-to-peak amplitude of MEPs, whereas PASLTD will decrease the amplitude, replicating previous work. They will then extend these previous findings by examining TEPs. The authors anticipate modulation of the P30 and P60, which are TEPs thought to reflect local cortical excitability. They plan to account for the MEP reafference which may also mediate the P60 amplitude by stimulating at sub- and supra- motor threshold. Further, they hypothesize an increase of the N100, a marker of inhibitory processing mediated by GABA, by PASLTD. Finally, the authors will also examine the impact of cortical excitability over time to determine the duration of the PAS effects.   
 
This detailed examination of TEPs following PAS stimulation will determine which TEPs could be used as biomarkers with the induction of LTP and LTD through stimulation. The authors have built in an MEP replication for the PAS stimulation, supporting previous literature and acting as a positive control.  
 
The Stage 1 manuscript was evaluated by three expert reviewers across two rounds. Following in-depth review and responses from the authors, the recommender determined that Stage 1 criteria was met and awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/detjc (under temporary private embargo)
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA. 
 
List of eligible PCI RR-friendly journals:
 

References
 
1. Arrigoni, E., Bolognini, N., Pisoni, A. & Guidali, G. (2024). Neurophysiological correlates of plasticity induced by paired associative stimulation (PAS) targeting the motor cortex: a TMS-EEG registered report. In principle acceptance of Version 3 by Peer Community in Registered Reports. https://osf.io/detjc
Neurophysiological correlates of plasticity induced by paired associative stimulation (PAS) targeting the motor cortex: a TMS-EEG registered reportEleonora Arrigoni, Nadia Bolognini, Alberto Pisoni, Giacomo Guidali<p>Paired associative stimulation (PAS) can induce long-term potentiation (LTP) and long-term depression (LTD) in the human motor system by applying transcranial magnetic stimulation (TMS) pulses on the primary motor cortex (M1) paired with electr...Life SciencesGrace Edwards2023-07-22 10:25:21 View
28 Feb 2024
STAGE 1

Changes in memory function in adults following SARS-CoV-2 infection: findings from the Covid and Cognition online study

Is memory affected in the long run following SARS-CoV-2 infection?

Recommended by ORCID_LOGO based on reviews by Phivos Phylactou, Dipanjan Ray and Mitul Mehta
COVID-19 has been suspected to have long-lasting effects on cognitive function. The SARS-CoV-2 virus may enter the central nervous system (Frontera et al., 2020; Miners, Kehoe, & Love, 2020), explaining the observed detrimental effects of COVID-19 on verbal planning and reasoning (Hampshire et al., 2021; Wild et al., 2021), executive function (Hadad et al., 2022), and long-term memory (Guo et al., 2022). In particular, Guo et al. (2022) used verbal item recognition and non-verbal associative memory tasks. Weinerova et al. (2024), in the current study, propose to conduct a replication of Guo et al. (2022), but specifically, to disentangle the effect of COVID-19 infection status on both memory type (item vs. associative) and stimulus modality (verbal vs. non-verbal). Furthermore, Weinerova et al. (2024) propose to analyze cognitive function based on vaccination status before infection to provide a critical test of the potential protective effects of vaccination on cognitive function.

Data collection has been completed with 325 participants after exclusion criteria were applied (COVID group N = 232, No COVID group N = 93). Simulations assuming an effect size observed in Guo et al. (2022), a Bayesian t-test comparing the groups, and a Bayes Factor of 6 indicated that N = 320 is sufficient to detect an effect on 79% of simulations. The main analyses will be conducted using a Bayesian ANCOVA that allows for the inclusion of control variables such as age, sex, country, and education level. Both accuracy and reaction times from the item and associative recognition tasks will be analyzed as the dependent variables. In one analysis, vaccination status will be included as a between-subjects factor, to understand whether vaccination status at the time of infection influences subsequent cognitive function. 

It is important to note that participants were recruited through long-COVID Facebook groups and clinics. Therefore, the results must be interpreted carefully to avoid generalizing to all COVID-19 infections. The data are part of a larger longitudinal study, and the current pre-registration applies only to the baseline timepoint for a cross-sectional analysis. The remaining longitudinal data collection is ongoing and is not part of the current pre-registration.  

The study plan was refined after one round of review, with input from three external reviewers who all agreed that the proposed study was well-designed and scientifically valid. The recommender then reviewed the revised manuscript and judged that the study met the Stage 1 criteria for in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/tjs5u (under temporary private embargo)
 
Level of bias control achieved: Level 3. At least some data/evidence that will be used to the answer the research question has been previously accessed by the authors (e.g. downloaded or otherwise received), but the authors certify that they have not yet observed ANY part of the data/evidence.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Frontera, J., Mainali, S., Fink, E.L. et al. Global Consortium Study of Neurological Dysfunction in COVID-19 (GCS-NeuroCOVID): Study Design and Rationale. Neurocrit Care 33, 25–34 (2020). https://doi.org/10.1007/s12028-020-00995-3

2. Guo, P., Benito Ballesteros, A., Yeung, S. P., Liu, R., Saha, A., Curtis, L., Kaser, M., Haggard, M. P. & Cheke, L. G. (2022). COVCOG 2: Cognitive and Memory Deficits in Long COVID: A Second Publication From the COVID and Cognition Study. Frontiers in Aging Neuroscience. https://doi.org/10.3389/fnagi.2022.804937  

3. Hadad, R., Khoury, J., Stanger, C., Fisher, T., Schneer, S., Ben-Hayun, R., Possin, K., Valcour, V., Aharon-Peretz, J. & Adir, Y. (2022). Cognitive dysfunction following COVID-19 infection. Journal of NeuroVirology, 28(3), 430–437. https://doi.org/10.1007/s13365-022-01079-y  

4. Hampshire, A., Trender, W., Chamberlain, S. R., Jolly, A. E., Grant, J. E., Patrick, F., Mazibuko, N., Williams, S. C., Barnby, J. M., Hellyer, P. & Mehta, M. A. (2021). Cognitive deficits in people who have recovered from COVID-19. EClinicalMedicine, 39, 101044. https://doi.org/10.1016/j.eclinm.2021.101044

5. Miners, S., Kehoe, P. G., & Love, S. (2020). Cognitive impact of COVID-19: looking beyond the short term. Alzheimer's research & therapy, 12, 1-16. https://doi.org/10.1186/s13195-020-00744-w 
 
6. Weinerova, J., Yeung, S., Guo, P., Yau, A., Horne, C., Ghinn, M., Curtis, L., Adlard, F., Bhagat, V., Zhang, S., Kaser, M., Bozic, M., Schluppeck, D., Reid, A., Tibon, R. & Cheke, L. G. (2024). Changes in memory function in adults following SARS-CoV-2 infection: findings from the Covid and Cognition online study. In principle acceptance of Version 2 by Peer Community in Registered Reports. https://osf.io/tjs5u

7. Wild, C. J., Norton, L., Menon, D. K., Ripsman, D. A., Swartz, R. H. & Owen, A. M. (2022). Disentangling the cognitive, physical, and mental health sequelae of COVID-19. Cell Reports Medicine, 3, 100750. https://doi.org/10.1016/j.xcrm.2022.100750 
Changes in memory function in adults following SARS-CoV-2 infection: findings from the Covid and Cognition online studyJosefina Weinerova, Sabine Yeung, Panyuan Guo, Alice Yau, Connor Horne, Molly Ghinn, Lyn Curtis, Francess Adlard, Vidita Bhagat, Seraphina Zhang, Muzaffer Kaser, Mirjana Bozic, Denis Schluppeck, Andrew Reid, Roni Tibon, Lucy Cheke<p>SARS-CoV-2, the virus responsible for the Covid-19 pandemic, has been shown to have an impact on cognitive function, but the specific aspects of cognition that are affected remain unclear. In this Registered Report, we present a study aimed at ...Life SciencesVishnu Sreekumar2023-08-14 11:09:45 View
06 Jun 2024
STAGE 1

Causal dynamics of task-relevant rule and stimulus processing in prefrontal cortex

Functional specificity of cognitive updating in human prefrontal cortex

Recommended by ORCID_LOGO based on reviews by Phivos Phylactou
One of the hallmarks of cognitive control is the ability to flexibly update attention and action when goals change. The prefrontal cortex has long been identified as important for such updating, but much remains to be understood about the anatomical and temporal mechanisms that support cognitive flexibility within prefrontal networks. In the current study, Jackson et al. (2024) build upon insights from recent transcranial magnetic stimulation (TMS) and neuroimaging studies to investigate the critical role of prefrontal cortex for updating goals and selecting behaviourally-relevant stimuli.
 
To measure updating, the authors deploy an attentional switching paradigm in which participants selectively attend to one feature of a novel object (colour or form) while ignoring the other feature. On each trial, a symbol (called a rule cue) indicates whether to attend to the colour (green or blue) or to the form (X or non-X) of the upcoming object. By mapping each stimulus response to a separate button press (two buttons for the two colours; two buttons for the two features), the authors can then categorise different types of behavioural errors – focusing especially on attending incorrectly to the task-irrelevant feature (rule error) vs. applying the correct rule but failing to correctly identify the task-relevant feature (stimulus error). If disruption of a specific cortical region causes a selective increase in one type of error, then this would indicate that the stimulated region is important for either rule processing or stimulus processing.
 
The proposal includes a number of key features that add depth and rigor to the investigation. First, to probe the anatomical specificity of cognitive control, the authors will contrast the effect of TMS delivered to different prefrontal regions that reside within different networks and may have divergent roles in cognitive control: the dorsolateral prefrontal cortex (dlPFC, part of the multiple-demand network) and dorsomedial prefrontal cortex (dmPFC, part of the default mode network). Moreover, unlike many previous TMS studies, the authors will use electric field modelling to normalise cortical stimulation strength between regions, enabling a more controlled anatomical comparison. Second, since the task involves responding to a rule cue and then selectively attending to a task-relevant feature, it is likely that a particular brain region could be selectively critical at a specific time – for instance, if dlPFC were important for rule processing then it should only be necessary shortly after (or around) presentation of the rule cue. To capture the temporal specificity of cortical involvement, the authors will apply a short burst of TMS at different times, beginning either +150ms after the cue or +700ms during stimulus processing. In a preliminary study, the authors used magnetoencephalography (MEG) in combination with the same behavioural task and multivariate pattern analysis (MVPA) to identify these epochs for TMS. Finally, the experiment includes a range of additional control conditions and quality checks to rule out alternative explanations of potential findings, such as TMS impairing perception of the rule cue rather than implementation of the rule, and the effect of peripheral TMS artefacts. Overall, the study promises to reveal a range of intriguing new insights into the timecourse and anatomical specificity of cognitive updating, with implications for theories of prefrontal cortical function.
 
The Stage 1 manuscript was evaluated over one round of in-depth review. Based on detailed responses to the reviewers' and recommender’s comments, the recommender judged that the manuscript met the Stage 1 criteria and therefore awarded in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/94sgu (under temporary private embargo)
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 

Jackon, J. B, Runhao, L., & Woolgar, A. (2024). Causal dynamics of task-relevant rule and stimulus processing in prefrontal cortex. In principle acceptance of Version 2 by Peer Community in Registered Reports. https://osf.io/94sgu

Causal dynamics of task-relevant rule and stimulus processing in prefrontal cortexJade Buse Jackson Runhao Lu Alex Woolgar<p>The dorsolateral prefrontal cortex (dlPFC) is understood to be important for cognitive flexibility, enabling us to switch between different contexts or rules, and to selectively attend to the relevant aspects of a task. Conversely, the dorsomed...Life SciencesChris Chambers2023-09-28 13:13:30 View
25 Jun 2024
STAGE 1

Does ‘virtuality’ affect the role of prior expectations in perception and action? Comparing predictive grip and lifting forces in real and virtual environments

The role of prior expectations for lifting objects in virtual reality

Recommended by ORCID_LOGO based on reviews by 2 anonymous reviewers
As virtual reality environments become more common, it is important to understand our sensorimotor interactions with them. In real world settings, sensory information is supplemented by prior expectations from past experiences, aiding efficient action control. In VR, the relative role of expectations could decrease due to a lack of prior experience with the environment, or increase because sensory information is impoverished or ambiguous. Harris, Arthur and Buckingham (2024) propose to test these possibilities by comparing a real-world object lifting task and a VR version in which the same objects are lifted but visual feedback is substituted by a virtual view. The experiment uses the Size-Weight Illusion (SWI) and the Material Weight Illusion (MWI). In these paradigms, the visual appearance of the object induces expectations about weight that can affect the perception of weight during lifting, and the fingertip forces generated. The degree to which the visual appearance of objects induces differences in perceived weight, and in measured fingertip forces, will index the influence of prior expectations for these two paradigms. The analyses will test whether the influence of prior expectations is lower or higher in the VR set-up than in real-world lifting. The outcomes across tasks (SWI and MWI) and measures (perceived weight, fingertip forces) will broaden our understanding of the role of predictive sensorimotor control in novel virtual environments.
 
After three rounds of evaluation, with input from two external reviewers, the recommender judged that the Stage 1 manuscript met the criteria for in-principle acceptance (IPA).
 
URL to the preregistered Stage 1 protocol: https://osf.io/36jhb
 
Level of bias control achieved: Level 6. No part of the data or evidence that will be used to answer the research question yet exists and no part will be generated until after IPA.
 
List of eligible PCI RR-friendly journals:
 
 
References
 
1. Harris, D. J., Arthur, T., & Buckingham, G. (2024). Does ‘virtuality’ affect the role of prior expectations in perception and action? Comparing predictive grip and lifting forces in real and virtual environments. In principle acceptance of Version 4 by Peer Community in Registered Reports. https://osf.io/36jhb
 
Does ‘virtuality’ affect the role of prior expectations in perception and action? Comparing predictive grip and lifting forces in real and virtual environmentsDavid J. Harris, Tom Arthur, & Gavin Buckingham<p>Recent theories in cognitive science propose that prior expectations strongly influence how individuals perceive the world and control their actions. This influence is particularly relevant in novel sensory environments, such as virtual reality...Life SciencesRobert McIntosh Ben van Buren2023-11-22 12:25:57 View